“Applied
Computational Biology and Statistics in Biotechnology and Bioinformatics”: ISBN9789380235929; Year2012; Pages1172 pages, 25cm; Language;English
Editor: Ajit Kumar
Roy: Consultant
(Statistics), Department of Economics and Statistics, College of Fisheries,
Central Agricultural University, Lembucherra-799 210, Agartala, Tripura (W),
India

The
book will be useful for all those working in Biotechnology sector in general
and particularly researchers working in the laboratories of ICAR, CSIR, SAU’s
and many more institutions engaged R&D activities.
Contents
Foreword
Preface
List of Contributors
Part-1: 1. Bioinformatics,
Genomics and Proteomics
Chapter-01
Microarrays: Introduction, Applications and Data Analysis by Chirayu Goswami
Chapter-02
Functional Genomics by
Sudipa Chakravarty and Amit Chakravarty
Chapter-03
Software Tools and Resources for Bioinformatics Research by Anil Raj, Jyotika Bhati and S.B.
Lal
Chapter-04
Databases, Web Resources and Computational Tools Useful for Bioinformatics
Research by Anindya Sundar Barman
and Mamta Singh
Chapter-05
An Insight into Uniparental Gene Silencing and Assessment of Genomic Affinities
of Different Species by R.S.
Talluri
Chapter-06
Bioinformatics and Biotechnological Studies in One of the Highly Valuable
Plants Crocus sativus L.: A State of the Art by
Hilal Khaliq, Dinesh Parmar and N.C. Sharma
Chapter-07
A Review of Computational Biology and Bioinformatics Driven Research in Indian
Catfish by Surajit Debnath
Chapter-08
Recent Trends in Fish Genomics by
N.S. Nagpure, Arunima Kumar Verma, S.P. Sngh and U.K. Sarkar
Chapter-09
Advances in Proteomics: Principles, Methods and Bioinformatics by Suman Patel
Chapter-10
Expressed Sequence Tags (ESTs): Resource for in silico Prediction of SSR and
SNP by Rajender Singh and
Sonia Sheoran
Chapter-11
Structure and Functional Analysis of The Putative beta-galactosidase in
Zymomonas mobilis by S.
Sheik Asraf, K.N. Rajnish and P. Gunasekaran
Chapter-12
Chromosomes and Nuclear DNA Amounts to Deduce Evolutionary Relationship of The
Species by R.S. Talluri
2. Phylogeny
Chapter-13
Molecular Evolution and Phylogenetic Analysis by Chirayu Goswami
Chapter-14
Computational Phylogenicity of Biological Pathways: A Study of Some TCA Cycles by Losiana Nayak, Namrata Tomar and
Rajat K. De
Chapter-15
Plant DNA Barcoding: Molecular Phylogeny-Tracking by Nano Devices by R.S. Talluri
Chapter-16
Phylogenetic Analysis of Microbes using Bioinformatic Tools by Showkat A. Lone and Jasdeep
Chatrath Padaria
Chapter-17
Construction of Phylogenetic Tree: Methods with An Empirical Example of rdnA
Sequence by Mamta Singh and
Anindya Sundar Barman
Chapter-18
Barriers of Gene Flow and Crossability of Species in Relation to Phylogenic
Position by R.S. Talluri
3. Drug Design and Epigenomic
Chapter-19
High Throughput Biomedical Instrumentations and Use in Medical Bioinformatics by Anjan Roy, Vikramjit Poddar and
Ajit Kumar Roy
Chapter-20
Epigenetic Regulation of the Genome and Personalized Medicine by Amit Chakravarty and Sudipa
Chakravarty
Chapter-21
Computational Toxicology: A Powerful Tool Towards the Drug Designing by Sunil Kumar Tripathi, Poonam Singh
and Sanjeev K. Singh
Chapter-22
Modern Quantum Mechanical Methods Applied to Accurate in Silico Drug Designing by Arpita Yadav, Minakshi Sonker and
Abhay Krishna
Chapter-23
Active Sites Prediction on Molecular Modeling Studies by Selvaraj C., Sunil Kumar Tripathi
and Sanjeev Kumar Singh
Chapter-24
Bioinformatics Approaches in Phytoremediation by Sudeep Roy, Dwijendra K. Gupta and Ashok Sharma
Part-2: 4. Advanced
Computational Tools and Techniques
Chapter-25
Machine Learning Methods for Bioinformatics by
H.C. Verma
Chapter-26
Biclustering of Gene Microarray Data Using Multi-Objective Evolutionary
Optimization Algorithms by
Sourav Sikdar, Arghya Kumar Pal, Veera Talukdar and Amit Konar
Chapter-27
Computational Approaches to Protein Domain Identification by Nita Parekh
Chapter-28
Computational Methods in Protein Engineering and Design by Divya P. Syamaladevi
Chapter-29
Conceptualization of Converging Nanotechnology and Bioinformatics: Applications
in Medicine by Abhishek
Shukla, Pranjal Chandra, Pallavi Somvanshi, Tanmaya Kumar Sahu, Neelima Garg,
Muthukumar M. and Bhartendu Nath Mishra
Chapter-30
Potential Web Based Computational and Communicational Tools to Impact
Agriculture in India by
Acushla Antony
Chapter-31
DNA Barcoding – Present Status and Future Prospects with Special Reference to
Fisheries Sector by Ranendra
K. Majumdar
Chapter-32
Advanced Spatial Planning Tools for Integrating Environmental Data into
Bioinformatics and Conservation of Biodiversity by M. Jayanthi
Chapter-33
Application of GPS, GIS and Related Techniques in the Diagnosis and Management
of Plant Diseases by S.
Saha, A.B. Rai and B.K. Sharma
Chapter-34
Application of Artificial Neural Network for Prediction of Rice Yields in
Andaman and Nicobar Islands by
M. Balakrishnan, N. Ravisankar, R.C. Srivastava and K. Singh
Chapter-35
Application of Innovative Biotechnological Tools in Food Processing Industries by A.A. Fazal and G. Vidya Sagar Reddy
5. Statistical Methods for Computational Biology, Data
Mining and Visualisation
Chapter-36
An Insight to Application of Computational Statistics and Computational Biology
in Bioinformatics by Ajit
Kumar Roy
Chapter-37
Advanced Statistical Methods in Bioinformatics by Piyush Kant Rai
Chapter-38
Areas of Application of Statistical Tools in Agricultural Bioinformatics by C. Sarada, R. Venugopalan and K.
Alivelu
Chapter-39
Theory of Probability and its Application in Bioinformatics by Satyabrata Pal and Subhabaha Pal
Chapter-40
Distribution Free Tests for Microarray Data by
K. Alivelu, C. Sarada and M. Padmaiah
Chapter-41
Data Mining and Pattern Analysis of Molecular Data Through Principal Component
Analysis by Ravi R. Saxena,
Shiv Narayan Sharma, Zenu Jha and Ritu R. Saxena
Chapter-42
Data Mining and Text Mining in Bioinformatics by Karnati Konda Reddy and Sanjeev K. Singh
6. Socio Economics and Ethics
Chapter-43
Current Socio-economic and Environmental Issues of Genetically Modified Crops
in Indian Context by A.D.
Upadhyay and D.K. Pandey
Chapter-44
Overview of Ethics and Issues of Biotechnologically and Genetically Modified
Crops by Biswarup Saha
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